HAP - Haplotype Analysis Tool


Welcome to the HAP Website HAP is a haplotype analysis system which is aimed in helping geneticists perform disease association studies. The main feature of HAP is a phasing method which is based on the assumption of imperfect phylogeny. The phasing method is very efficient, which allows HAP to work with very large data sets, and to perform other operations such as finding a partition of the region into blocks of limited diversity or performing association tests on each of these blocks. HAP is an ongoing project, constantly being improved, thanks to many people who are helping with its maintenance and development. Please visit the credits section to see the list of people involved in the research and development of HAP. Part of the HAP Website is based upon work supported by the National Science Foundation under Grant No. 0513612. NEWS: February 17th, 2005 "Whole-Genome Patterns of Common DNA Variation in Three Human Populations" is published on the cover of Science. UCSD Article. MSNBC News. AAAS Release. Science Cover. Supplemetnary material for the Science paper. If you have any questions or comments about HAP, please email